Please be aware that the most recent public version of FoodMicrobionet will always made available on GitHub. Versions on Mendeley data are released when a new paper is released (and this is not very often).
GitHub or Mendeley Data
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Category Archives: GitHub
FMBNanalyzer
I have upgraded the old FMBNanalyzer script. It now comes in the form of a R script and a Rmarkdown document. The latter generates nice .html reports. Both operate on ***_agg.RDS lists extracted from ShinyFMBN. The script will be available on GitHub. Any help with testing is appreciated.
FoodMicrobionet on GitHub
All the scripts we use to process raw sequences and to prep data for inclusion in FoodMicrobionet are now public on GitHub. Visit the FoodMicrobionet repository to view the most recent versions of the scripts.
FoodMicrobionet on GitHub
I am completely new at using GitHub and I am not sure I want to transform FoodMicrobionet in a collaborative project, but I have decided to create a public repository with FoodMicrobionet app and data on GitHub (well, the published versions). You can find it here: https://github.com/ep142/FoodMicrobionet.